BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007C03SP1|AL425658
(759 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1544 1438 0.0
>3x_Contig1544
Length = 10626
Score = 1438 bits (724), Expect = 0.0
Identities = 752/760 (98%), Gaps = 2/760 (0%)
Strand = Plus / Plus
Query: 1 gtcttttctgtattgtgaaagcagatctgacaatggggctgtgatcttccggtacaattt 60
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6855 gtcttttctgtatgg-gaaagcagatctgacaatggggctgtgatcttccggtacaatga 6913
Query: 61 ggtgtctgggttcatccaagttatcagaaaaaacaatctggatcacgtgcacattacagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6914 ggtgtctgggttcatccaagttatcagaaaaaacaatctggatcacgtgcacattacagc 6973
Query: 121 acgtgacttgaaa-tttctttcttttacatcgcttcgaatatgaagtcatctcagccagt 179
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6974 acgtgacttgaaaatttctttcttttacatcgcttcgaatatgaagtcatctcagccagt 7033
Query: 180 tatccaagaratgagatgagatgagataaaccaataggtttatacaattctaggaaccag 239
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7034 tatccaagagatgagatgagatgagataaaccaataggtttatacaattctaggaaccag 7093
Query: 240 catcgatattgtgacgcccaaatgaacggtatatttgctattgagaagcctagtggggtt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7094 catcgatattgtgacgcccaaatgaacggtatatttgctattgagaagcctagtggggtt 7153
Query: 300 acctccaacagtttcttgcaacaattgaagaatgctctcatgaagagcactattttccag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7154 acctccaacagtttcttgcaacaattgaagaatgctctcatgaagagcactattttccag 7213
Query: 360 aaagacatccaaaaggcagtaatggatagatcccagcaatacgccaaggagaccggtaag 419
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 7214 aaagacatccaaaaggcagtgatggatagatcccagcaatacgccaaggagaccggtaag 7273
Query: 420 aagcctagtaaacggaagcttagaaaagtgtctcagatcaaaatgggacacggcggtaca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7274 aagcctagtaaacggaagcttagaaaagtgtctcagatcaaaatgggacacggcggtaca 7333
Query: 480 ctggatcctctggcttcaggagtcatggtcattgggattggtagtgggaccaagaaattg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7334 ctggatcctctggcttcaggagtcatggtcattgggattggtagtgggaccaagaaattg 7393
Query: 540 tccgaatatttgggtaattgtaccaagatatacgagactgaagcgttattcggtgtagca 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7394 tccgaatatttgggtaattgtaccaagatatacgagactgaagcgttattcggtgtagca 7453
Query: 600 acgacgtctggtgatagcsagggtgatattataactgaaacctcggttaagcatttgaca 659
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 7454 acgacgtctggtgatagcgagggtgatattataactgaaacctcggttaagcatttgaca 7513
Query: 660 tgggacgatttgaagactgtagaggcaaaatttgtgggccatttgaaacaaactccacca 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7514 tgggacgatttgaagactgtagaggcaaaatttgtgggccatttgaaacaaactccacca 7573
Query: 720 atttacgctgctttgaaattgaatgggaaaccgttgtacg 759
||||||||||||||||||||||||||||||||||||||||
Sbjct: 7574 atttacgctgctttgaaattgaatgggaaaccgttgtacg 7613
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5988
Number of Sequences: 1807
Number of extensions: 5988
Number of successful extensions: 308
Number of sequences better than 1.0e-20: 1
length of query: 759
length of database: 10,358,551
effective HSP length: 16
effective length of query: 743
effective length of database: 10,329,639
effective search space: 7674921777
effective search space used: 7674921777
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)